Maybe it's doing you a favor? At low SOC the voltage sag from full throttle usually forces the low voltage cut off to trip anyway. More expensive controllers are programmable, slightly less ones support open source software replacement or an advanced settings option, but many other cheaper controllers you get what you get. So upgrade to more expensive controller might provide this, but likely wouldn't be as beneficial as upgrading the battery. I've seen people switch in booster packs too, to up the voltage, but that's too much of a fire risk for me.