I think Spinningmagnets may have misunderstood also then. Very low resistance between the motor phases is quite normal. It will be probably less less the an ohm so very close to dead short. I saw pictures of you motor opened up. The winding looked perfect in the pictures.
Below is typical Delta 3 phase motor connection. Resistance between each phase should be equal. if you have a miss match in resistance or an open circuit between phases, then you have a winding problem. Check need to be made with the controller disconnected of course. If your motor is open circuit between phase (which I highly doubt) the failure is catastrophic. The winding will will blacked and it will smell like hell.
In relation test measuring the controller, measure resistance between the battery connection negative and each of the three phases. The multimeter should read just under 10kohm. If the reading is zero a failed FETs has been identified. Now do the same measurement from the positive battery connection to each of the phase. If you pick up a zero reading, you again have a dead fet. Any of these readings will typically be about 10K or open circuit on a healthy controller.